Human SNP ID | rs334809 |
---|---|
Human chromosome | chr3 |
Human SNP position | 3088537 |
Pig chromosome | chr13 |
Pig SNP position | 65966252 |
PubMed ID | 23362303 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23362303 |
Study | Genome-wide association study identifies novel loci associated with concentrations of four plasma phospholipid fatty acids in the de novo lipogenesis pathway: results from the Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) consortiu |
Disease/Trait | Oleic acid (18:1n-9) plasma levels |
Initial sample | 8,961 European ancestry individuals |
Replication sample | |
Region | 3p26.2 |
Chromosome id | chr3 |
Chromosome position | 3088537 |
Reported gene | IL5RA |
Mapped gene | IL5RA |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 3568 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs334809-A |
SNPs | rs334809 |
Merged | 0 |
SNP id current | 334809 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.3286 |
%95 Ci | unit increase |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | phospholipid measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004639 |
Study accession | GCST001834 |