SNP Detail For rs333960
1.Mapping Information
Human SNP ID rs333960
Human chromosome chr1
Human SNP position 109896858
Pig chromosome chr4
Pig SNP position 120618276
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1p13.3
Chromosome idchr1
Chromosome position109896858
Reported geneCSF1
Mapped geneEPS8L3 - CSF1
Upstream gene id79574
Downstream gene id1435
SNP gene ids
Upstream gene distance132836
Downstream gene distance13753
SNP risk allelers333960-G
SNPsrs333960
Merged0
SNP id current333960
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency0.144
P value0.0000002
Pvalue mlog6.69897000433601
P value text(QUICKl)
Or beta0.04
%95 Ci[NR] unit increase
PlatformIllumina [899892]
CNVN
Mapped traitinsulin sensitivity measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004471
Study accessionGCST001762