Human SNP ID | rs333960 |
---|---|
Human chromosome | chr1 |
Human SNP position | 109896858 |
Pig chromosome | chr4 |
Pig SNP position | 120618276 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 1p13.3 |
Chromosome id | chr1 |
Chromosome position | 109896858 |
Reported gene | CSF1 |
Mapped gene | EPS8L3 - CSF1 |
Upstream gene id | 79574 |
Downstream gene id | 1435 |
SNP gene ids | |
Upstream gene distance | 132836 |
Downstream gene distance | 13753 |
SNP risk allele | rs333960-G |
SNPs | rs333960 |
Merged | 0 |
SNP id current | 333960 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | 0.144 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (QUICKl) |
Or beta | 0.04 |
%95 Ci | [NR] unit increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | insulin sensitivity measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004471 |
Study accession | GCST001762 |