SNP Detail For rs333332
1.Mapping Information
Human SNP ID rs333332
Human chromosome chr3
Human SNP position 124609647
Pig chromosome chr13
Pig SNP position 145200263
2.Annotation Information
PubMed ID25130324
JournalGenes Brain Behav
Linkwww.ncbi.nlm.nih.gov/pubmed/25130324
StudyA genome-wide search for quantitative trait loci affecting the cortical surface area and thickness of Heschl__s gyrus.
Disease/TraitHeschl__s gyrus morphology
Initial sample1,778 European ancestry individuals, 1,276 individuals
Replication sampleNA
Region3q21.2
Chromosome idchr3
Chromosome position124609647
Reported geneKALRN
Mapped geneKALRN
Upstream gene id
Downstream gene id
SNP gene ids8997
Upstream gene distance
Downstream gene distance
SNP risk allelers333332-T
SNPsrs333332
Merged0
SNP id current333332
Contextintron_variant
Intergenic0
Allele frequency0.33
P value0.000002
Pvalue mlog5.69897000433601
P value text(Left HG area)
Or beta13.81
%95 Ciunit decrease
PlatformAffymetrix, Illumina [4103035] (imputed)
CNVN
Mapped traitHeschl__s gyrus morphology measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005852
Study accessionGCST002579