SNP Detail For rs331615
1.Mapping Information
Human SNP ID rs331615
Human chromosome chr20
Human SNP position 57063481
Pig chromosome chr17
Pig SNP position 64675473
2.Annotation Information
PubMed ID21738478
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21738478
StudyIdentification of nine novel loci associated with white blood cell subtypes in a Japanese population.
Disease/TraitWhite blood cell types
Initial sample8,794 Japanese ancestry individuals
Replication sample5,998 Japanese ancestry individuals
Region20q13.31
Chromosome idchr20
Chromosome position57063481
Reported geneBMP7
Mapped geneLOC105372684 - LOC105372685
Upstream gene id105372684
Downstream gene id105372685
SNP gene ids
Upstream gene distance11954
Downstream gene distance53708
SNP risk allelers331615-T
SNPsrs331615
Merged0
SNP id current331615
Contextintergenic_variant
Intergenic1
Allele frequency0.37
P value0.0000009
Pvalue mlog6.04575749056067
P value text(eosinophil count)
Or beta0.06
%95 Ci[0.04-0.08] unit increase
PlatformIllumina [2178645] (imputed)
CNVN
Mapped traiteosinophil count
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004842
Study accessionGCST001134