Human SNP ID | rs331615 |
---|---|
Human chromosome | chr20 |
Human SNP position | 57063481 |
Pig chromosome | chr17 |
Pig SNP position | 64675473 |
PubMed ID | 21738478 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21738478 |
Study | Identification of nine novel loci associated with white blood cell subtypes in a Japanese population. |
Disease/Trait | White blood cell types |
Initial sample | 8,794 Japanese ancestry individuals |
Replication sample | 5,998 Japanese ancestry individuals |
Region | 20q13.31 |
Chromosome id | chr20 |
Chromosome position | 57063481 |
Reported gene | BMP7 |
Mapped gene | LOC105372684 - LOC105372685 |
Upstream gene id | 105372684 |
Downstream gene id | 105372685 |
SNP gene ids | |
Upstream gene distance | 11954 |
Downstream gene distance | 53708 |
SNP risk allele | rs331615-T |
SNPs | rs331615 |
Merged | 0 |
SNP id current | 331615 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.37 |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | (eosinophil count) |
Or beta | 0.06 |
%95 Ci | [0.04-0.08] unit increase |
Platform | Illumina [2178645] (imputed) |
CNV | N |
Mapped trait | eosinophil count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004842 |
Study accession | GCST001134 |