SNP Detail For rs3227
1.Mapping Information
Human SNP ID rs3227
Human chromosome chr6
Human SNP position 33694518
Pig chromosome chr7
Pig SNP position 34507135
2.Annotation Information
PubMed ID23722424
JournalScience
Linkwww.ncbi.nlm.nih.gov/pubmed/23722424
StudyGWAS of 126,559 individuals identifies genetic variants associated with educational attainment.
Disease/TraitEducational attainment
Initial sampleup to 101,069 European ancestry individuals
Replication sample25,490 European ancestry individuals
Region6p21.31
Chromosome idchr6
Chromosome position33694518
Reported geneITPR3
Mapped geneITPR3
Upstream gene id
Downstream gene id
SNP gene ids3710
Upstream gene distance
Downstream gene distance
SNP risk allelers3227-C
SNPsrs3227
Merged0
SNP id current3227
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.498
P value0.0000003
Pvalue mlog6.52287874528033
P value text(College)
Or beta1.037
%95 Ci[NR]
PlatformAffymetrix, Illumina, Perlegen [up to 2309290] (imputed)
CNVN
Mapped traitself reported educational attainment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004784
Study accessionGCST002045