Human SNP ID | rs322662 |
---|---|
Human chromosome | chr3 |
Human SNP position | 25315382 |
Pig chromosome | chr13 |
Pig SNP position | 13843134 |
PubMed ID | 25972035 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25972035 |
Study | Association of common variants in the calcium-sensing receptor gene with serum calcium levels in East Asians. |
Disease/Trait | Calcium levels |
Initial sample | 4,558 Korean ancestry individuals |
Replication sample | 4,093 Korean ancestry individuals |
Region | 3p24.2 |
Chromosome id | chr3 |
Chromosome position | 25315382 |
Reported gene | RARB |
Mapped gene | RARB |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 5915 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs322662-A |
SNPs | rs322662 |
Merged | 0 |
SNP id current | 322662 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.107 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 0.00288 |
%95 Ci | [0.0017-0.0041] unit increase |
Platform | Affymetrix [1219546] (imputed) |
CNV | N |
Mapped trait | calcium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004838 |
Study accession | GCST002911 |