SNP Detail For rs3213545
1.Mapping Information
Human SNP ID rs3213545
Human chromosome chr12
Human SNP position 121033534
Pig chromosome chr14
Pig SNP position 43425496
2.Annotation Information
PubMed ID21943158
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/21943158
StudyGenetic variants in LPL, OASL and TOMM40/APOE-C1-C2-C4 genes are associated with multiple cardiovascular-related traits.
Disease/TraitCardiovascular disease risk factors
Initial sample11,683 European ancestry individuals
Replication sampleNA
Region12q24.31
Chromosome idchr12
Chromosome position121033534
Reported geneOASL
Mapped geneOASL
Upstream gene id
Downstream gene id
SNP gene ids8638
Upstream gene distance
Downstream gene distance
SNP risk allelers3213545-A
SNPsrs3213545
Merged0
SNP id current3213545
Contextsynonymous_variant
Intergenic0
Allele frequency0.3
P value0.000000000000004
Pvalue mlog14.397940008672
P value text(GGT)
Or beta0.121
%95 Ci[0.092-0.150] units/l decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitserum gamma-glutamyl transferase measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004532
Study accessionGCST001247