SNP Detail For rs3181157
1.Mapping Information
Human SNP ID rs3181157
Human chromosome chr12
Human SNP position 6199357
Pig chromosome chr5
Pig SNP position 66921717
2.Annotation Information
PubMed ID23776197
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23776197
StudyGenome-wide association study identifies ephrin type A receptors implicated in paclitaxel induced peripheral sensory neuropathy.
Disease/TraitPaclitaxel-induced neuropathy
Initial sample143 European ancestry individuals
Replication sample
Region12p13.31
Chromosome idchr12
Chromosome position6199357
Reported geneCD9
Mapped geneLOC105369623 - CD9
Upstream gene id105369623
Downstream gene id928
SNP gene ids
Upstream gene distance18416
Downstream gene distance487
SNP risk allelers3181157-A
SNPsrs3181157
Merged0
SNP id current3181157
Contextupstream_gene_variant
Intergenic1
Allele frequency0.1
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta3.22
%95 Ci[1.96-5.29]
PlatformIllumina [518577]
CNVN
Mapped traitbrain serotonin transporter measurement, response to paclitaxel
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004569, http://purl.obolibrary.org/obo/GO_1901555
Study accessionGCST002074