Human SNP ID | rs314590 |
---|---|
Human chromosome | chr7 |
Human SNP position | 4434501 |
Pig chromosome | chr3 |
Pig SNP position | 4040483 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 7p22.2 |
Chromosome id | chr7 |
Chromosome position | 4434501 |
Reported gene | SDK1 |
Mapped gene | SDK1 - LOC105375133 |
Upstream gene id | 221935 |
Downstream gene id | 105375133 |
SNP gene ids | |
Upstream gene distance | 165501 |
Downstream gene distance | 99244 |
SNP risk allele | rs314590-G |
SNPs | rs314590 |
Merged | 0 |
SNP id current | 314590 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.271 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (Vitamin B12 ) |
Or beta | 0.02 |
%95 Ci | [NR] pmol/L increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | vitamin B12 measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004620 |
Study accession | GCST001762 |