SNP Detail For rs314590
1.Mapping Information
Human SNP ID rs314590
Human chromosome chr7
Human SNP position 4434501
Pig chromosome chr3
Pig SNP position 4040483
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region7p22.2
Chromosome idchr7
Chromosome position4434501
Reported geneSDK1
Mapped geneSDK1 - LOC105375133
Upstream gene id221935
Downstream gene id105375133
SNP gene ids
Upstream gene distance165501
Downstream gene distance99244
SNP risk allelers314590-G
SNPsrs314590
Merged0
SNP id current314590
Contextintergenic_variant
Intergenic1
Allele frequency0.271
P value0.000004
Pvalue mlog5.39794000867203
P value text(Vitamin B12 )
Or beta0.02
%95 Ci[NR] pmol/L increase
PlatformIllumina [899892]
CNVN
Mapped traitvitamin B12 measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004620
Study accessionGCST001762