SNP Detail For rs314580
1.Mapping Information
Human SNP ID rs314580
Human chromosome chr13
Human SNP position 89259450
Pig chromosome chr11
Pig SNP position 64971301
2.Annotation Information
PubMed ID26433762
JournalJ Affect Disord
Linkwww.ncbi.nlm.nih.gov/pubmed/26433762
StudyA genome-wide association study of bipolar disorder with comorbid eating disorder replicates the SOX2-OT region.
Disease/TraitBipolar disorder and eating disorder
Initial sample184 European ancestry cases with bipolar disorder and eating disorder, 1,370 European ancestry controls
Replication sampleNA
Region13q31.2
Chromosome idchr13
Chromosome position89259450
Reported geneNR
Mapped geneLINC00440
Upstream gene id
Downstream gene id
SNP gene ids100874172
Upstream gene distance
Downstream gene distance
SNP risk allelers314580-G
SNPsrs314580
Merged
SNP id current314580
Contextintergenic_variant
Intergenic0
Allele frequency0.04
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta2.41
%95 Ci[NR]
PlatformAffymetrix [703012]
CNVN
Mapped traiteating disorder, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005203, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST003135