Human SNP ID | rs314580 |
---|---|
Human chromosome | chr13 |
Human SNP position | 89259450 |
Pig chromosome | chr11 |
Pig SNP position | 64971301 |
PubMed ID | 26433762 |
---|---|
Journal | J Affect Disord |
Link | www.ncbi.nlm.nih.gov/pubmed/26433762 |
Study | A genome-wide association study of bipolar disorder with comorbid eating disorder replicates the SOX2-OT region. |
Disease/Trait | Bipolar disorder and eating disorder |
Initial sample | 184 European ancestry cases with bipolar disorder and eating disorder, 1,370 European ancestry controls |
Replication sample | NA |
Region | 13q31.2 |
Chromosome id | chr13 |
Chromosome position | 89259450 |
Reported gene | NR |
Mapped gene | LINC00440 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100874172 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs314580-G |
SNPs | rs314580 |
Merged | |
SNP id current | 314580 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | 0.04 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | |
Or beta | 2.41 |
%95 Ci | [NR] |
Platform | Affymetrix [703012] |
CNV | N |
Mapped trait | eating disorder, bipolar disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005203, http://www.ebi.ac.uk/efo/EFO_0000289 |
Study accession | GCST003135 |