SNP Detail For rs3136739
1.Mapping Information
Human SNP ID rs3136739
Human chromosome chr8
Human SNP position 42347562
Pig chromosome chr17
Pig SNP position 13116814
2.Annotation Information
PubMed ID24578379
JournalArterioscler Thromb Vasc Biol
Linkwww.ncbi.nlm.nih.gov/pubmed/24578379
StudyGenome-wide association study for circulating tissue plasminogen activator levels and functional follow-up implicates endothelial STXBP5 and STX2.
Disease/TraitPlasma plasminogen activator levels
Initial sample26,217 European ancestry individuals, 712 Orcadian individuals
Replication sample4,487 European ancestry individuals
Region8p11.21
Chromosome idchr8
Chromosome position42347562
Reported genePOLB
Mapped genePOLB
Upstream gene id
Downstream gene id
SNP gene ids5423
Upstream gene distance
Downstream gene distance
SNP risk allelers3136739-A
SNPsrs3136739
Merged0
SNP id current3136739
Contextintron_variant
Intergenic0
Allele frequency0.95
P value0.000000001
Pvalue mlog9
P value text
Or beta0.063
%95 Ci[0.043-0.083] unit increase
PlatformAffymetrix, Illumina [2455857] (imputed)
CNVN
Mapped traittissue plasminogen activator measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004791
Study accessionGCST002374