Human SNP ID | rs3135758 |
---|---|
Human chromosome | chr10 |
Human SNP position | 121518355 |
Pig chromosome | chr14 |
Pig SNP position | 142500115 |
PubMed ID | 25886283 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/25886283 |
Study | Genome-wide association study of serum minerals levels in children of different ethnic background. |
Disease/Trait | Magnesium levels |
Initial sample | 2,317 European ancestry children, 1,283 African-American ancestry children |
Replication sample | NA |
Region | 10q26.13 |
Chromosome id | chr10 |
Chromosome position | 121518355 |
Reported gene | NR |
Mapped gene | FGFR2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 2263 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3135758-A |
SNPs | rs3135758 |
Merged | 0 |
SNP id current | 3135758 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (EA) |
Or beta | 0.05774 |
%95 Ci | (-0.08136--0.03413) mg/dl decrease |
Platform | Illumina [up to 509150] |
CNV | N |
Mapped trait | magnesium measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004845 |
Study accession | GCST002860 |