SNP Detail For rs3135758
1.Mapping Information
Human SNP ID rs3135758
Human chromosome chr10
Human SNP position 121518355
Pig chromosome chr14
Pig SNP position 142500115
2.Annotation Information
PubMed ID25886283
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25886283
StudyGenome-wide association study of serum minerals levels in children of different ethnic background.
Disease/TraitMagnesium levels
Initial sample2,317 European ancestry children, 1,283 African-American ancestry children
Replication sampleNA
Region10q26.13
Chromosome idchr10
Chromosome position121518355
Reported geneNR
Mapped geneFGFR2
Upstream gene id
Downstream gene id
SNP gene ids2263
Upstream gene distance
Downstream gene distance
SNP risk allelers3135758-A
SNPsrs3135758
Merged0
SNP id current3135758
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text(EA)
Or beta0.05774
%95 Ci(-0.08136--0.03413) mg/dl decrease
PlatformIllumina [up to 509150]
CNVN
Mapped traitmagnesium measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004845
Study accessionGCST002860