SNP Detail For rs3134945
1.Mapping Information
Human SNP ID rs3134945
Human chromosome chr6
Human SNP position 32178715
Pig chromosome chr7
Pig SNP position 28036753
2.Annotation Information
PubMed ID21323541
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/21323541
StudyRisk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy.
Disease/TraitIdiopathic membranous nephropathy
Initial sample556 European ancestry cases, 2,338 European ancestry controls
Replication sampleNA
Region6p21.32
Chromosome idchr6
Chromosome position32178715
Reported geneRNF5
Mapped geneRNF5
Upstream gene id
Downstream gene id
SNP gene ids6048
Upstream gene distance
Downstream gene distance
SNP risk allelers3134945-T
SNPsrs3134945
Merged0
SNP id current3134945
Contextintron_variant
Intergenic0
Allele frequency0.2049
P value2E-40
Pvalue mlog39.698970004336
P value text
Or beta2.54
%95 Ci[NR]
PlatformIllumina [242824]
CNVN
Mapped traitmembranous glomerulonephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004254
Study accessionGCST000984