SNP Detail For rs312274
1.Mapping Information
Human SNP ID rs312274
Human chromosome chr12
Human SNP position 40852478
Pig chromosome chr5
Pig SNP position 75194262
2.Annotation Information
PubMed ID23934736
JournalGenet Epidemiol
Linkwww.ncbi.nlm.nih.gov/pubmed/23934736
StudyGenome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study.
Disease/TraitMetabolite levels (X-11787)
Initial sample1,260 African American individuals
Replication sampleNA
Region12q12
Chromosome idchr12
Chromosome position40852478
Reported geneCNTN1
Mapped geneCNTN1
Upstream gene id
Downstream gene id
SNP gene ids1272
Upstream gene distance
Downstream gene distance
SNP risk allelers312274-A
SNPsrs312274
Merged0
SNP id current312274
Contextintron_variant
Intergenic0
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.05
%95 Ci[0.03-0.08] unit decrease
PlatformAffymetrix [~ 2500000] (imputed)
CNVN
Mapped traithydroxy-leucine measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005276
Study accessionGCST002119