SNP Detail For rs3118515
1.Mapping Information
Human SNP ID rs3118515
Human chromosome chr9
Human SNP position 134544468
Pig chromosome chr1
Pig SNP position 307918117
2.Annotation Information
PubMed ID23493294
JournalInvest Ophthalmol Vis Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/23493294
StudyA genome-wide association study of central corneal thickness in Latinos.
Disease/TraitCentral corneal thickness
Initial sample1,644 Latino individuals
Replication sample124 Latino individuals
Region9q34.3
Chromosome idchr9
Chromosome position134544468
Reported geneCOL5A1, RXRA, LOC100506532
Mapped geneLOC100506532
Upstream gene id
Downstream gene id
SNP gene ids100506532
Upstream gene distance
Downstream gene distance
SNP risk allelers3118515-A
SNPsrs3118515
Merged0
SNP id current3118515
Contextintron_variant
Intergenic0
Allele frequency0.262
P value0.0000000008
Pvalue mlog9.09691001300805
P value text
Or beta0.23
%95 Ci[NR] unit decrease
PlatformIllumina [6290547] (imputed)
CNVN
Mapped traiteye measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004731
Study accessionGCST001903