Human SNP ID | rs3118515 |
---|---|
Human chromosome | chr9 |
Human SNP position | 134544468 |
Pig chromosome | chr1 |
Pig SNP position | 307918117 |
PubMed ID | 23493294 |
---|---|
Journal | Invest Ophthalmol Vis Sci |
Link | www.ncbi.nlm.nih.gov/pubmed/23493294 |
Study | A genome-wide association study of central corneal thickness in Latinos. |
Disease/Trait | Central corneal thickness |
Initial sample | 1,644 Latino individuals |
Replication sample | 124 Latino individuals |
Region | 9q34.3 |
Chromosome id | chr9 |
Chromosome position | 134544468 |
Reported gene | COL5A1, RXRA, LOC100506532 |
Mapped gene | LOC100506532 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100506532 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3118515-A |
SNPs | rs3118515 |
Merged | 0 |
SNP id current | 3118515 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.262 |
P value | 0.0000000008 |
Pvalue mlog | 9.09691001300805 |
P value text | |
Or beta | 0.23 |
%95 Ci | [NR] unit decrease |
Platform | Illumina [6290547] (imputed) |
CNV | N |
Mapped trait | eye measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004731 |
Study accession | GCST001903 |