Human SNP ID | rs3110643 |
---|---|
Human chromosome | chr17 |
Human SNP position | 37713484 |
Pig chromosome | chr12 |
Pig SNP position | 40815399 |
PubMed ID | 26154020 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/26154020 |
Study | A genome-wide screening and SNPs-to-genes approach to identify novel genetic risk factors associated with frontotemporal dementia. |
Disease/Trait | Frontotemporal dementia |
Initial sample | 530 European ancestry cases, 926 European ancestry controls |
Replication sample | NA |
Region | 17q12 |
Chromosome id | chr17 |
Chromosome position | 37713484 |
Reported gene | HNF1B |
Mapped gene | HNF1B, LOC105371754 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 6928, 105371754 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3110643-C |
SNPs | rs3110643 |
Merged | |
SNP id current | 3110643 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.16 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.65 |
%95 Ci | [1.43-1.87] |
Platform | Illumina [2292247] (imputed) |
CNV | N |
Mapped trait | Frontotemporal dementia |
Mapped trait URI | http://www.orpha.net/ORDO/Orphanet_282 |
Study accession | GCST002960 |