SNP Detail For rs3103778
1.Mapping Information
Human SNP ID rs3103778
Human chromosome chr1
Human SNP position 39968099
Pig chromosome chr6
Pig SNP position 88943057
2.Annotation Information
PubMed ID23534349
JournalAnn Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23534349
StudyGeneralization of variants identified by genome-wide association studies for electrocardiographic traits in African Americans.
Disease/TraitPR interval
Initial sample455 African American individuals
Replication sampleNA
Region1p34.2
Chromosome idchr1
Chromosome position39968099
Reported geneMFSD2
Mapped geneMFSD2A
Upstream gene id
Downstream gene id
SNP gene ids84879
Upstream gene distance
Downstream gene distance
SNP risk allelers3103778-G
SNPsrs3103778
Merged0
SNP id current3103778
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta6.3
%95 Ci[NR] ms increase
PlatformIllumina [> 930000]
CNVN
Mapped traitPR interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462
Study accessionGCST001925