SNP Detail For rs3099950
1.Mapping Information
Human SNP ID rs3099950
Human chromosome chr2
Human SNP position 38882417
Pig chromosome chr3
Pig SNP position 107608020
2.Annotation Information
PubMed ID19451621
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/19451621
StudyReduced expression of the Kinesin-Associated Protein 3 (KIFAP3) gene increases survival in sporadic amyotrophic lateral sclerosis.
Disease/TraitAmyotrophic lateral sclerosis
Initial sample1,821 cases, 2,258 controls
Replication sample538 cases, 556 controls
Region2p22.1
Chromosome idchr2
Chromosome position38882417
Reported geneNR
Mapped geneMORN2
Upstream gene id
Downstream gene id
SNP gene ids729967
Upstream gene distance
Downstream gene distance
SNP risk allelers3099950-?
SNPsrs3099950
Merged0
SNP id current3099950
Contextmissense_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(survival)
Or beta
%95 Ci
PlatformIllumina [288357]
CNVN
Mapped traitamyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253
Study accessionGCST000406