SNP Detail For rs3096697
1.Mapping Information
Human SNP ID rs3096697
Human chromosome chr6
Human SNP position 32166733
Pig chromosome chr7
Pig SNP position 28023918
2.Annotation Information
PubMed ID21323541
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/21323541
StudyRisk HLA-DQA1 and PLA(2)R1 alleles in idiopathic membranous nephropathy.
Disease/TraitIdiopathic membranous nephropathy
Initial sample556 European ancestry cases, 2,338 European ancestry controls
Replication sampleNA
Region6p21.32
Chromosome idchr6
Chromosome position32166733
Reported geneEGFL8
Mapped geneEGFL8, PPT2-EGFL8
Upstream gene id
Downstream gene id
SNP gene ids80864, 100532746
Upstream gene distance
Downstream gene distance
SNP risk allelers3096697-T
SNPsrs3096697
Merged0
SNP id current3096697
Contextmissense_variant
Intergenic0
Allele frequency0.2054
P value1E-41
Pvalue mlog41
P value text
Or beta2.58
%95 Ci[NR]
PlatformIllumina [242824]
CNVN
Mapped traitmembranous glomerulonephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004254
Study accessionGCST000984