SNP Detail For rs3096696
1.Mapping Information
Human SNP ID rs3096696
Human chromosome chr6
Human SNP position 32154695
Pig chromosome chr7
Pig SNP position 28010447
2.Annotation Information
PubMed ID25987655
JournalBlood
Linkwww.ncbi.nlm.nih.gov/pubmed/25987655
StudyGenome-wide analysis links NFATC2 with asparaginase hypersensitivity.
Disease/TraitAsparaginase hypersensitivity in acute lymphoblastic leukemia
Initial sample3,126 child cases
Replication sample182 child cases
Region6p21.32
Chromosome idchr6
Chromosome position32154695
Reported genePPT2
Mapped genePPT2-EGFL8, PPT2
Upstream gene id
Downstream gene id
SNP gene ids100532746, 9374
Upstream gene distance
Downstream gene distance
SNP risk allelers3096696 -A
SNPsrs3096696
Merged0
SNP id current3096696
Contextmissense_variant
Intergenic0
Allele frequency
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta1.478
%95 Ci
PlatformAffymetrix [NR]
CNVN
Mapped traitasparaginase hypersensitivity, acute lymphoblastic leukemia
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004881, http://www.ebi.ac.uk/efo/EFO_0000220
Study accessionGCST002915