Human SNP ID | rs3096696 |
---|---|
Human chromosome | chr6 |
Human SNP position | 32154695 |
Pig chromosome | chr7 |
Pig SNP position | 28010447 |
PubMed ID | 25987655 |
---|---|
Journal | Blood |
Link | www.ncbi.nlm.nih.gov/pubmed/25987655 |
Study | Genome-wide analysis links NFATC2 with asparaginase hypersensitivity. |
Disease/Trait | Asparaginase hypersensitivity in acute lymphoblastic leukemia |
Initial sample | 3,126 child cases |
Replication sample | 182 child cases |
Region | 6p21.32 |
Chromosome id | chr6 |
Chromosome position | 32154695 |
Reported gene | PPT2 |
Mapped gene | PPT2-EGFL8, PPT2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 100532746, 9374 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3096696 -A |
SNPs | rs3096696 |
Merged | 0 |
SNP id current | 3096696 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | 1.478 |
%95 Ci | |
Platform | Affymetrix [NR] |
CNV | N |
Mapped trait | asparaginase hypersensitivity, acute lymphoblastic leukemia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004881, http://www.ebi.ac.uk/efo/EFO_0000220 |
Study accession | GCST002915 |