Human SNP ID | rs3094212 |
---|---|
Human chromosome | chr6 |
Human SNP position | 31117993 |
Pig chromosome | chr7 |
Pig SNP position | 27310938 |
PubMed ID | 20139978 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20139978 |
Study | Genome-wide association study of hematological and biochemical traits in a Japanese population. |
Disease/Trait | White blood cell count |
Initial sample | 14,677 Japanese ancestry individuals |
Replication sample | NA |
Region | 6p21.33 |
Chromosome id | chr6 |
Chromosome position | 31117993 |
Reported gene | PSORS1C1, CDSN |
Mapped gene | CDSN, PSORS1C1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 1041, 170679 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs3094212-C |
SNPs | rs3094212 |
Merged | 0 |
SNP id current | 3094212 |
Context | non_coding_transcript_exon_variant |
Intergenic | 0 |
Allele frequency | 0.35 |
P value | 0.000000007 |
Pvalue mlog | 8.15490195998574 |
P value text | |
Or beta | 0.07 |
%95 Ci | [0.046-0.094] unit increase |
Platform | Illumina [561583] |
CNV | N |
Mapped trait | leukocyte count |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004308 |
Study accession | GCST000589 |