SNP Detail For rs307896
1.Mapping Information
Human SNP ID rs307896
Human chromosome chr19
Human SNP position 47158236
Pig chromosome chr6
Pig SNP position 48358974
2.Annotation Information
PubMed ID21833088
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/21833088
StudyGenetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis.
Disease/TraitMultiple sclerosis
Initial sample9,772 European ancestry cases, 16,849 European ancestry controls
Replication sample4,218 European ancestry cases, 7,296 European ancestry controls
Region19q13.32
Chromosome idchr19
Chromosome position47158236
Reported geneSAE1
Mapped geneSAE1
Upstream gene id
Downstream gene id
SNP gene ids10055
Upstream gene distance
Downstream gene distance
SNP risk allelers307896-G
SNPsrs307896
Merged0
SNP id current307896
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000005
Pvalue mlog6.30102999566398
P value text
Or beta1.09
%95 Ci[1.08-1.11]
PlatformIllumina [465434]
CNVN
Mapped traitmultiple sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003885
Study accessionGCST001198