Human SNP ID | rs307896 |
---|---|
Human chromosome | chr19 |
Human SNP position | 47158236 |
Pig chromosome | chr6 |
Pig SNP position | 48358974 |
PubMed ID | 21833088 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21833088 |
Study | Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 9,772 European ancestry cases, 16,849 European ancestry controls |
Replication sample | 4,218 European ancestry cases, 7,296 European ancestry controls |
Region | 19q13.32 |
Chromosome id | chr19 |
Chromosome position | 47158236 |
Reported gene | SAE1 |
Mapped gene | SAE1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10055 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs307896-G |
SNPs | rs307896 |
Merged | 0 |
SNP id current | 307896 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000005 |
Pvalue mlog | 6.30102999566398 |
P value text | |
Or beta | 1.09 |
%95 Ci | [1.08-1.11] |
Platform | Illumina [465434] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001198 |