SNP Detail For rs305009
1.Mapping Information
Human SNP ID rs305009
Human chromosome chr15
Human SNP position 69853419
Pig chromosome chr1
Pig SNP position 185695864
2.Annotation Information
PubMed ID23509962
JournalBMC Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23509962
StudyA genome-wide search for common SNP x SNP interactions on the risk of venous thrombosis.
Disease/TraitVenous thromboembolism (SNP x SNP interaction)
Initial sample411 European ancestry cases, 1,228 European ancestry controls
Replication sample1,542 European ancestry cases, 1,110 European ancestry controls
Region8p22 x 15q23
Chromosome idchr8 x 15
Chromosome position13121891 x 69853419
Reported geneNR x NR
Mapped geneDLC1 x LINC00593 - LOC101929129
Upstream gene id
Downstream gene id
SNP gene ids
Upstream gene distance
Downstream gene distance
SNP risk allelers12541254-A x rs305009-A
SNPsrs12541254 x rs305009
Merged0
SNP id current
Contextintron_variant x regulatory_region_variant
Intergenic
Allele frequency
P value0.000000003
Pvalue mlog8.52287874528033
P value text
Or beta1.65
%95 Ci[NR]
PlatformIllumina [291872]
CNVN
Mapped traitvenous thromboembolism
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004286
Study accessionGCST001913