SNP Detail For rs3025383
1.Mapping Information
Human SNP ID rs3025383
Human chromosome chr9
Human SNP position 133637247
Pig chromosome chr1
Pig SNP position 307178905
2.Annotation Information
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region9q34.2
Chromosome idchr9
Chromosome position133637247
Reported geneDBH
Mapped geneDBH
Upstream gene id
Downstream gene id
SNP gene ids1621
Upstream gene distance
Downstream gene distance
SNP risk allelers3025383-T
SNPsrs3025383
Merged0
SNP id current3025383
Contextintron_variant
Intergenic0
Allele frequency0.718
P value0.0000009
Pvalue mlog6.04575749056067
P value text
Or beta0.051
%95 CiNR unit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitforced expiratory volume, response to bronchodilator
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004314, http://purl.obolibrary.org/obo/GO_0097366
Study accessionGCST003262
PubMed ID26634245
JournalBMC Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26634245
StudyA genome-wide association study identifies risk loci for spirometric measures among smokers of European and African ancestry.
Disease/TraitPost bronchodilator FEV1/FVC ratio
Initial sample10,094 European ancestry current and former smoker individuals, 3,260 African American current and former smoker individuals, 178 current and former smoker individuals
Replication sampleNA
Region9q34.2
Chromosome idchr9
Chromosome position133637247
Reported geneDBH
Mapped geneDBH
Upstream gene id
Downstream gene id
SNP gene ids1621
Upstream gene distance
Downstream gene distance
SNP risk allelers3025383-T
SNPsrs3025383
Merged0
SNP id current3025383
Contextintron_variant
Intergenic0
Allele frequency0.715
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.01
%95 Ciunit decrease
PlatformIllumina [NR] (imputed)
CNVN
Mapped traitresponse to bronchodilator, FEV/FEC ratio
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0097366, http://www.ebi.ac.uk/efo/EFO_0004713
Study accessionGCST003264