SNP Detail For rs3025343
1.Mapping Information
Human SNP ID rs3025343
Human chromosome chr9
Human SNP position 133613233
Pig chromosome chr1
Pig SNP position 307164196
2.Annotation Information
PubMed ID20418890
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20418890
StudyGenome-wide meta-analyses identify multiple loci associated with smoking behavior.
Disease/TraitSmoking behavior
Initial sampleUp to 74,035 European ancestry individuals
Replication sampleUp to 68,988 participants
Region9q34.2
Chromosome idchr9
Chromosome position133613233
Reported geneDBH
Mapped geneFAM163B - DBH
Upstream gene id642968
Downstream gene id1621
SNP gene ids
Upstream gene distance3313
Downstream gene distance23130
SNP risk allelers3025343-G
SNPsrs3025343
Merged0
SNP id current3025343
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency0.84
P value0.00000004
Pvalue mlog7.39794000867203
P value text(smoking cessation)
Or beta1.12
%95 Ci[1.08-1.18]
PlatformAffymetrix, Illumina, Perlegen [~ 2500000] (imputed)
CNVN
Mapped traitsmoking behavior
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004318
Study accessionGCST000666