SNP Detail For rs2974438
1.Mapping Information
Human SNP ID rs2974438
Human chromosome chr5
Human SNP position 168823898
Pig chromosome chr16
Pig SNP position 59625648
2.Annotation Information
PubMed ID25282103
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25282103
StudyDefining the role of common variation in the genomic and biological architecture of adult human height.
Disease/TraitHeight
Initial sample253,288 European ancestry individuals
Replication sample80,067 European ancestry individuals
Region5q34
Chromosome idchr5
Chromosome position168823898
Reported geneSLIT3
Mapped geneSLIT3
Upstream gene id
Downstream gene id
SNP gene ids6586
Upstream gene distance
Downstream gene distance
SNP risk allelers2974438-A
SNPsrs2974438
Merged0
SNP id current2974438
Contextintron_variant
Intergenic0
Allele frequency0.203
P value4E-24
Pvalue mlog23.397940008672
P value text
Or beta0.037
%95 Ci[0.029-0.045] unit decrease
PlatformAffymetrix, Illumina, Perlegen [2550858] (imputed)
CNVN
Mapped traitbody height
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004339
Study accessionGCST002647