Human SNP ID | rs2972219 |
---|---|
Human chromosome | chr5 |
Human SNP position | 118647917 |
Pig chromosome | chr2 |
Pig SNP position | 127845837 |
PubMed ID | 24529757 |
---|---|
Journal | Neurobiol Aging |
Link | www.ncbi.nlm.nih.gov/pubmed/24529757 |
Study | Genome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations. |
Disease/Trait | Amyotrophic lateral sclerosis (sporadic) |
Initial sample | 250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls |
Replication sample | NA |
Region | 5q23.1 |
Chromosome id | chr5 |
Chromosome position | 118647917 |
Reported gene | LOC100287135 |
Mapped gene | LOC102467225 - LOC105379142 |
Upstream gene id | 102467225 |
Downstream gene id | 105379142 |
SNP gene ids | |
Upstream gene distance | 19825 |
Downstream gene distance | 48992 |
SNP risk allele | rs2972219-? |
SNPs | rs2972219 |
Merged | 0 |
SNP id current | 2972219 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [859311] |
CNV | N |
Mapped trait | sporadic amyotrophic lateral sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001357 |
Study accession | GCST002337 |