SNP Detail For rs2966
1.Mapping Information
Human SNP ID rs2966
Human chromosome chr6
Human SNP position 33721743
Pig chromosome chr7
Pig SNP position 34546644
2.Annotation Information
PubMed ID25201988
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/25201988
StudyCommon genetic variants associated with cognitive performance identified using the proxy-phenotype method.
Disease/TraitEducational attainment
Initial sample106,736 European ancestry individuals
Replication sampleNA
Region6p21.31
Chromosome idchr6
Chromosome position33721743
Reported geneintergenic
Mapped geneIP6K3
Upstream gene id
Downstream gene id
SNP gene ids117283
Upstream gene distance
Downstream gene distance
SNP risk allelers2966-T
SNPsrs2966
Merged0
SNP id current2966
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.452
P value0.0000004
Pvalue mlog6.39794000867203
P value text
Or beta0.022
%95 Ci[NR] unit increase
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitself reported educational attainment
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004784
Study accessionGCST002598