SNP Detail For rs294958
1.Mapping Information
Human SNP ID rs294958
Human chromosome chr5
Human SNP position 152188538
Pig chromosome chr16
Pig SNP position 76987266
2.Annotation Information
PubMed ID24024966
JournalJ Clin Periodontol
Linkwww.ncbi.nlm.nih.gov/pubmed/24024966
StudyGenome-wide association study of chronic periodontitis in a general German population.
Disease/TraitPeriodontitis (PAL4Q3)
Initial sampleup to 2,969 European ancestry individuals
Replication sampleNA
Region5q33.1
Chromosome idchr5
Chromosome position152188538
Reported geneNMUR2
Mapped geneLOC101927115
Upstream gene id
Downstream gene id
SNP gene ids101927115
Upstream gene distance
Downstream gene distance
SNP risk allelers294958-A
SNPsrs294958
Merged0
SNP id current294958
Contextintron_variant
Intergenic0
Allele frequency0.48
P value0.000005
Pvalue mlog5.30102999566398
P value text(Age 20-81 years)
Or beta1.29
%95 Ci[1.16-1.44]
PlatformAffymetrix, Illumina [up to 17585496] (imputed)
CNVN
Mapped traitperiodontitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000649
Study accessionGCST002136