Human SNP ID | rs294958 |
---|---|
Human chromosome | chr5 |
Human SNP position | 152188538 |
Pig chromosome | chr16 |
Pig SNP position | 76987266 |
PubMed ID | 24024966 |
---|---|
Journal | J Clin Periodontol |
Link | www.ncbi.nlm.nih.gov/pubmed/24024966 |
Study | Genome-wide association study of chronic periodontitis in a general German population. |
Disease/Trait | Periodontitis (PAL4Q3) |
Initial sample | up to 2,969 European ancestry individuals |
Replication sample | NA |
Region | 5q33.1 |
Chromosome id | chr5 |
Chromosome position | 152188538 |
Reported gene | NMUR2 |
Mapped gene | LOC101927115 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101927115 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs294958-A |
SNPs | rs294958 |
Merged | 0 |
SNP id current | 294958 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.48 |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (Age 20-81 years) |
Or beta | 1.29 |
%95 Ci | [1.16-1.44] |
Platform | Affymetrix, Illumina [up to 17585496] (imputed) |
CNV | N |
Mapped trait | periodontitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000649 |
Study accession | GCST002136 |