SNP Detail For rs2944542
1.Mapping Information
Human SNP ID rs2944542
Human chromosome chr10
Human SNP position 62610240
Pig chromosome chr14
Pig SNP position 71343698
2.Annotation Information
PubMed ID26482879
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26482879
StudyMulti-ancestry genome-wide association study of 21,000 cases and 95,000 controls identifies new risk loci for atopic dermatitis.
Disease/TraitAtopic dermatitis
Initial sample18,900 European ancestry cases, 1,472 Japanese ancestry cases, 422 African American cases, 300 Latino cases, 305 cases, 84,166 European ancestry controls, 7,966 Japanese ancestry controls, 844 African American controls, 1,592 Latino controls, 896 controls
Replication sample30,588 European ancestry cases, 459 African American cases, 1,012 Chinese ancestry cases, 226,537 European ancestry controls, 729 African American controls, 1,362 Chinese ancestry controls
Region10q21.2
Chromosome idchr10
Chromosome position62610240
Reported geneZNF365
Mapped geneZNF365
Upstream gene id
Downstream gene id
SNP gene ids22891
Upstream gene distance
Downstream gene distance
SNP risk allelers2944542-G
SNPsrs2944542
Merged0
SNP id current2944542
Contextintron_variant
Intergenic0
Allele frequency0.59
P value0.000001
Pvalue mlog6
P value text(EA, fixed effects)
Or beta1.0638298
%95 Ci
PlatformIllumina [15539996] (imputed)
CNVN
Mapped traitatopic eczema
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000274
Study accessionGCST003184