Human SNP ID | rs2929282 |
---|---|
Human chromosome | chr15 |
Human SNP position | 43953733 |
Pig chromosome | chr1 |
Pig SNP position | 142238601 |
PubMed ID | 20686565 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20686565 |
Study | Biological, clinical and population relevance of 95 loci for blood lipids. |
Disease/Trait | Triglycerides |
Initial sample | 96,598 European ancestry individuals |
Replication sample | NA |
Region | 15q15.3 |
Chromosome id | chr15 |
Chromosome position | 43953733 |
Reported gene | FRMD5 |
Mapped gene | FRMD5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84978 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2929282-T |
SNPs | rs2929282 |
Merged | 0 |
SNP id current | 2929282 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.05 |
P value | 0.00000000002 |
Pvalue mlog | 10.698970004336 |
P value text | |
Or beta | 5.13 |
%95 Ci | [3.44-6.82] mg/dL increase |
Platform | Affymetrix, Illumina, Perlegen [~ 2600000] (imputed) |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST000758 |
PubMed ID | 24097068 |
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24097068 |
Study | Discovery and refinement of loci associated with lipid levels. |
Disease/Trait | Triglycerides |
Initial sample | 94,595 European ancestry individuals |
Replication sample | 93,982 European ancestry individuals |
Region | 15q15.3 |
Chromosome id | chr15 |
Chromosome position | 43953733 |
Reported gene | FRMD5 |
Mapped gene | FRMD5 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 84978 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2929282-T |
SNPs | rs2929282 |
Merged | 0 |
SNP id current | 2929282 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.07 |
P value | 0.000000002 |
Pvalue mlog | 8.69897000433601 |
P value text | |
Or beta | 0.072 |
%95 Ci | [NR] mg/dL increase |
Platform | NR [NR] (imputed) |
CNV | N |
Mapped trait | triglyceride measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004530 |
Study accession | GCST002216 |