Human SNP ID | rs290986 |
---|---|
Human chromosome | chr9 |
Human SNP position | 90801254 |
Pig chromosome | chr14 |
Pig SNP position | 2765937 |
PubMed ID | 21833088 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/21833088 |
Study | Genetic risk and a primary role for cell-mediated immune mechanisms in multiple sclerosis. |
Disease/Trait | Multiple sclerosis |
Initial sample | 9,772 European ancestry cases, 16,849 European ancestry controls |
Replication sample | 4,218 European ancestry cases, 7,296 European ancestry controls |
Region | 9q22.2 |
Chromosome id | chr9 |
Chromosome position | 90801254 |
Reported gene | SYK |
Mapped gene | OR7E108P - SYK |
Upstream gene id | 81363 |
Downstream gene id | 6850 |
SNP gene ids | |
Upstream gene distance | 49014 |
Downstream gene distance | 426 |
SNP risk allele | rs290986-A |
SNPs | rs290986 |
Merged | 0 |
SNP id current | 290986 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | |
Or beta | 1.1 |
%95 Ci | [1.08-1.12] |
Platform | Illumina [465434] |
CNV | N |
Mapped trait | multiple sclerosis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003885 |
Study accession | GCST001198 |