SNP Detail For rs2904524
1.Mapping Information
Human SNP ID rs2904524
Human chromosome chr12
Human SNP position 70296305
Pig chromosome chr5
Pig SNP position 37155679
2.Annotation Information
PubMed ID22959728
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/22959728
StudyAge of onset of amyotrophic lateral sclerosis is modulated by a locus on 1p34.1.
Disease/TraitAmyotrophic lateral sclerosis (age of onset)
Initial sample4,243 European ancestry cases
Replication sampleNA
Region12q15
Chromosome idchr12
Chromosome position70296305
Reported geneCNOT2
Mapped geneCNOT2, LOC105369825
Upstream gene id
Downstream gene id
SNP gene ids4848, 105369825
Upstream gene distance
Downstream gene distance
SNP risk allelers2904524-T
SNPsrs2904524
Merged0
SNP id current2904524
Contextintron_variant
Intergenic0
Allele frequency0.13
P value0.000005
Pvalue mlog5.30102999566398
P value text(Joint)
Or beta
%95 Ci
PlatformIllumina [254145]
CNVN
Mapped traitamyotrophic lateral sclerosis, age at onset
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000253, http://www.ebi.ac.uk/efo/EFO_0004847
Study accessionGCST001663