SNP Detail For rs2903492
1.Mapping Information
Human SNP ID rs2903492
Human chromosome chr2
Human SNP position 624678
Pig chromosome chr3
Pig SNP position 141991293
2.Annotation Information
PubMed ID23563607
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23563607
StudyGenome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture.
Disease/TraitBody mass index
Initial sample7,962 European ancestry high body mass index individuals, 8,106 European ancestry low body mass index individuals
Replication sample4,900 European ancestry high body mass index individuals, 4,891 European ancestry low body mass index individuals
Region2p25.3
Chromosome idchr2
Chromosome position624678
Reported geneTMEM18
Mapped geneLOC105373352 - LOC105373353
Upstream gene id105373352
Downstream gene id105373353
SNP gene ids
Upstream gene distance62696
Downstream gene distance10959
SNP risk allelers2903492-A
SNPsrs2903492
Merged0
SNP id current2903492
Contextintergenic_variant
Intergenic1
Allele frequency0.83
P value0.000000000000006
Pvalue mlog14.2218487496163
P value text
Or beta1.26
%95 Ci[NR]
PlatformAffymetrix, Illumina [~ 2800000] (imputed)
CNVN
Mapped traitbody mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST001955