Human SNP ID | rs2903492 |
---|---|
Human chromosome | chr2 |
Human SNP position | 624678 |
Pig chromosome | chr3 |
Pig SNP position | 141991293 |
PubMed ID | 23563607 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23563607 |
Study | Genome-wide meta-analysis identifies 11 new loci for anthropometric traits and provides insights into genetic architecture. |
Disease/Trait | Body mass index |
Initial sample | 7,962 European ancestry high body mass index individuals, 8,106 European ancestry low body mass index individuals |
Replication sample | 4,900 European ancestry high body mass index individuals, 4,891 European ancestry low body mass index individuals |
Region | 2p25.3 |
Chromosome id | chr2 |
Chromosome position | 624678 |
Reported gene | TMEM18 |
Mapped gene | LOC105373352 - LOC105373353 |
Upstream gene id | 105373352 |
Downstream gene id | 105373353 |
SNP gene ids | |
Upstream gene distance | 62696 |
Downstream gene distance | 10959 |
SNP risk allele | rs2903492-A |
SNPs | rs2903492 |
Merged | 0 |
SNP id current | 2903492 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.83 |
P value | 0.000000000000006 |
Pvalue mlog | 14.2218487496163 |
P value text | |
Or beta | 1.26 |
%95 Ci | [NR] |
Platform | Affymetrix, Illumina [~ 2800000] (imputed) |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001955 |