SNP Detail For rs2901964
1.Mapping Information
Human SNP ID rs2901964
Human chromosome chr1
Human SNP position 15465931
Pig chromosome chr6
Pig SNP position 69082589
2.Annotation Information
PubMed ID20932654
JournalInt J Radiat Oncol Biol Phys
Linkwww.ncbi.nlm.nih.gov/pubmed/20932654
StudyGenome-wide association study to identify single nucleotide polymorphisms (SNPs) associated with the development of erectile dysfunction in African-American men after radiotherapy for prostate cancer.
Disease/TraitErectile dysfunction and prostate cancer treatment
Initial sample27 African American cases, 52 African American controls
Replication sampleNA
Region1p36.21
Chromosome idchr1
Chromosome position15465931
Reported geneELA2A
Mapped geneCELA2A
Upstream gene id
Downstream gene id
SNP gene ids63036
Upstream gene distance
Downstream gene distance
SNP risk allelers2901964-?
SNPsrs2901964
Merged0
SNP id current2901964
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency0.37
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta5.26
%95 Ci[NR]
PlatformAffymetrix [512497]
CNVN
Mapped traitresponse to radiation, prostate carcinoma, erectile dysfunction
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0009314, http://www.ebi.ac.uk/efo/EFO_0001663, http://www.ebi.ac.uk/efo/EFO_0004234
Study accessionGCST000824