SNP Detail For rs28998802
1.Mapping Information
Human SNP ID rs28998802
Human chromosome chr17
Human SNP position 27797882
Pig chromosome chr12
Pig SNP position 46059575
2.Annotation Information
PubMed ID26626624
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26626624
StudyGenome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.
Disease/TraitPsoriasis vulgaris
Initial sample4,007 European ancestry cases, 4,934 European ancestry controls
Replication sampleup to 9,075 European ancestry cases, up to European ancestry 12,726 controls
Region17q11.2
Chromosome idchr17
Chromosome position27797882
Reported geneNOS2
Mapped geneNOS2
Upstream gene id
Downstream gene id
SNP gene ids4843
Upstream gene distance
Downstream gene distance
SNP risk allelers28998802-A
SNPsrs28998802
Merged0
SNP id current28998802
Contextintron_variant
Intergenic0
Allele frequency0.143
P value0.0000000000003
Pvalue mlog12.5228787452803
P value text
Or beta1.255
%95 CiNR
PlatformIllumina [up to 11532644] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003268