Human SNP ID | rs2898261 |
---|---|
Human chromosome | chr8 |
Human SNP position | 11101029 |
Pig chromosome | chr14 |
Pig SNP position | 15801433 |
PubMed ID | 25017104 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25017104 |
Study | Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease. |
Disease/Trait | Eosinophilic esophagitis |
Initial sample | 657 European ancestry cases, 9,296 European ancestry controls |
Replication sample | NA |
Region | 8p23.1 |
Chromosome id | chr8 |
Chromosome position | 11101029 |
Reported gene | XKR6 |
Mapped gene | XKR6 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 286046 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2898261-C |
SNPs | rs2898261 |
Merged | 0 |
SNP id current | 2898261 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.58 |
P value | 0.00000005 |
Pvalue mlog | 7.30102999566398 |
P value text | |
Or beta | 1.35 |
%95 Ci | [NR] |
Platform | Illumina [1468075] |
CNV | N |
Mapped trait | eosinophilic esophagitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004232 |
Study accession | GCST002527 |