Human SNP ID | rs2891316 |
---|---|
Human chromosome | chr9 |
Human SNP position | 28587996 |
Pig chromosome | chr1 |
Pig SNP position | 263322291 |
PubMed ID | 24096698 |
---|---|
Journal | Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/24096698 |
Study | Genome-wide association study of endometrial cancer in E2C2. |
Disease/Trait | Endometrial cancer |
Initial sample | up to 2,695 European ancestry cases, up to 2,777 European ancestry controls |
Replication sample | up to 3,235 cases, up to 12,059 controls |
Region | 9p21.1 |
Chromosome id | chr9 |
Chromosome position | 28587996 |
Reported gene | LINGO2 |
Mapped gene | LOC105376004, LINGO2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 105376004, 158038 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2891316-? |
SNPs | rs2891316 |
Merged | 0 |
SNP id current | 2891316 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (European, All type I) |
Or beta | |
%95 Ci | |
Platform | Illumina [873935] |
CNV | N |
Mapped trait | endometrial neoplasm |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004230 |
Study accession | GCST002218 |