Human SNP ID | rs2860975 |
---|---|
Human chromosome | chr10 |
Human SNP position | 95007177 |
Pig chromosome | chr14 |
Pig SNP position | 115975270 |
PubMed ID | 22542470 |
---|---|
Journal | Vaccine |
Link | www.ncbi.nlm.nih.gov/pubmed/22542470 |
Study | Genome-wide association study of antibody response to smallpox vaccine. |
Disease/Trait | Immune response to smallpox vaccine (IL-6) |
Initial sample | 217 African American individuals, 580 European ancestry individuals, 217 Hispanic individuals |
Replication sample | NA |
Region | 10q23.33 |
Chromosome id | chr10 |
Chromosome position | 95007177 |
Reported gene | CYP2C9 |
Mapped gene | CYP2C9 - CYP2C8 |
Upstream gene id | 1559 |
Downstream gene id | 1558 |
SNP gene ids | |
Upstream gene distance | 17786 |
Downstream gene distance | 29595 |
SNP risk allele | rs2860975-? |
SNPs | rs2860975 |
Merged | 0 |
SNP id current | 2860975 |
Context | non_coding_transcript_exon_variant |
Intergenic | 1 |
Allele frequency | |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | (Hispanic) |
Or beta | |
%95 Ci | |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | response to vaccine |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004645 |
Study accession | GCST001491 |