SNP Detail For rs2860975
1.Mapping Information
Human SNP ID rs2860975
Human chromosome chr10
Human SNP position 95007177
Pig chromosome chr14
Pig SNP position 115975270
2.Annotation Information
PubMed ID22542470
JournalVaccine
Linkwww.ncbi.nlm.nih.gov/pubmed/22542470
StudyGenome-wide association study of antibody response to smallpox vaccine.
Disease/TraitImmune response to smallpox vaccine (IL-6)
Initial sample217 African American individuals, 580 European ancestry individuals, 217 Hispanic individuals
Replication sampleNA
Region10q23.33
Chromosome idchr10
Chromosome position95007177
Reported geneCYP2C9
Mapped geneCYP2C9 - CYP2C8
Upstream gene id1559
Downstream gene id1558
SNP gene ids
Upstream gene distance17786
Downstream gene distance29595
SNP risk allelers2860975-?
SNPsrs2860975
Merged0
SNP id current2860975
Contextnon_coding_transcript_exon_variant
Intergenic1
Allele frequency
P value0.0000002
Pvalue mlog6.69897000433601
P value text(Hispanic)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitresponse to vaccine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645
Study accessionGCST001491