SNP Detail For rs2859631
1.Mapping Information
Human SNP ID rs2859631
Human chromosome chr16
Human SNP position 78597897
Pig chromosome chr6
Pig SNP position 9443849
2.Annotation Information
PubMed ID20923822
JournalGenome Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20923822
StudyRadiation pharmacogenomics: a genome-wide association approach to identify radiation response biomarkers using human lymphoblastoid cell lines.
Disease/TraitRadiation response
Initial sample93 African American human lymphoblastoid cell lines, 89 European ancestry human lymphoblastoid cell lines, 95 Han Chinese ancestry human lymphoblastoid cell lines
Replication sampleNA
Region16q23.1
Chromosome idchr16
Chromosome position78597897
Reported geneWWOX
Mapped geneWWOX
Upstream gene id
Downstream gene id
SNP gene ids51741
Upstream gene distance
Downstream gene distance
SNP risk allelers2859631-?
SNPsrs2859631
Merged0
SNP id current2859631
Contextintron_variant
Intergenic0
Allele frequency0.07
P value0.000001
Pvalue mlog6
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina [1348798]
CNVN
Mapped traitresponse to radiation
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0009314
Study accessionGCST000823