Human SNP ID | rs285406 |
---|---|
Human chromosome | chr8 |
Human SNP position | 86012784 |
Pig chromosome | chr4 |
Pig SNP position | 55799369 |
PubMed ID | 22379998 |
---|---|
Journal | Pharmacogenomics |
Link | www.ncbi.nlm.nih.gov/pubmed/22379998 |
Study | Genome-wide mapping for clinically relevant predictors of lamotrigine- and phenytoin-induced hypersensitivity reactions. |
Disease/Trait | Adverse response to lamotrigine and phenytoin |
Initial sample | 34 European ancestry lamotrigine-induced hypersensitivity cases, 42 European ancestry phenytoin-induced hypersensitivity cases, 1,296 European ancestry controls |
Replication sample | NA |
Region | 8q21.3 |
Chromosome id | chr8 |
Chromosome position | 86012784 |
Reported gene | ATP6V0D2 |
Mapped gene | LOC105375622 - PSKH2 |
Upstream gene id | 105375622 |
Downstream gene id | 85481 |
SNP gene ids | |
Upstream gene distance | 151181 |
Downstream gene distance | 34325 |
SNP risk allele | rs285406-? |
SNPs | rs285406 |
Merged | 0 |
SNP id current | 285406 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000005 |
Pvalue mlog | 5.30102999566398 |
P value text | (LTG) |
Or beta | |
%95 Ci | |
Platform | Illumina [NR] |
CNV | N |
Mapped trait | response to anticonvulsant |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0036277 |
Study accession | GCST001431 |