SNP Detail For rs28530674
1.Mapping Information
Human SNP ID rs28530674
Human chromosome chr1
Human SNP position 18907640
Pig chromosome chr6
Pig SNP position 71474314
2.Annotation Information
PubMed ID25017104
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/25017104
StudyGenome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease.
Disease/TraitEosinophilic esophagitis
Initial sample657 European ancestry cases, 9,296 European ancestry controls
Replication sampleNA
Region1p36.13
Chromosome idchr1
Chromosome position18907640
Reported geneNR
Mapped geneIFFO2
Upstream gene id
Downstream gene id
SNP gene ids126917
Upstream gene distance
Downstream gene distance
SNP risk allelers28530674-?
SNPsrs28530674
Merged0
SNP id current28530674
Context3_prime_UTR_variant
Intergenic0
Allele frequency0.04
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta1.826
%95 Ci[NR]
PlatformIllumina [1468075]
CNVN
Mapped traiteosinophilic esophagitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004232
Study accessionGCST002527