Human SNP ID | rs28530674 |
---|---|
Human chromosome | chr1 |
Human SNP position | 18907640 |
Pig chromosome | chr6 |
Pig SNP position | 71474314 |
PubMed ID | 25017104 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25017104 |
Study | Genome-wide association analysis of eosinophilic esophagitis provides insight into the tissue specificity of this allergic disease. |
Disease/Trait | Eosinophilic esophagitis |
Initial sample | 657 European ancestry cases, 9,296 European ancestry controls |
Replication sample | NA |
Region | 1p36.13 |
Chromosome id | chr1 |
Chromosome position | 18907640 |
Reported gene | NR |
Mapped gene | IFFO2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 126917 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs28530674-? |
SNPs | rs28530674 |
Merged | 0 |
SNP id current | 28530674 |
Context | 3_prime_UTR_variant |
Intergenic | 0 |
Allele frequency | 0.04 |
P value | 0.0000003 |
Pvalue mlog | 6.52287874528033 |
P value text | |
Or beta | 1.826 |
%95 Ci | [NR] |
Platform | Illumina [1468075] |
CNV | N |
Mapped trait | eosinophilic esophagitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004232 |
Study accession | GCST002527 |