Human SNP ID | rs28523990 |
---|---|
Human chromosome | chr7 |
Human SNP position | 124796085 |
Pig chromosome | chr18 |
Pig SNP position | 24540500 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Lewy body disease |
Initial sample | up to 3,526 individuals |
Replication sample | NA |
Region | 7q31.33 |
Chromosome id | chr7 |
Chromosome position | 124796085 |
Reported gene | intergenic |
Mapped gene | LOC154872 - POT1 |
Upstream gene id | 154872 |
Downstream gene id | 25913 |
SNP gene ids | |
Upstream gene distance | 5275 |
Downstream gene distance | 26301 |
SNP risk allele | rs28523990-T |
SNPs | rs28523990 |
Merged | 0 |
SNP id current | 28523990 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.282 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | (Ordinal I) |
Or beta | 0.2719 |
%95 Ci | [0.15-0.39] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | Lewy body dementia, Lewy body dementia measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006792, http://www.ebi.ac.uk/efo/EFO_0006799 |
Study accession | GCST002591 |