Human SNP ID | rs28479400 |
---|---|
Human chromosome | chr15 |
Human SNP position | 99455679 |
Pig chromosome | chr1 |
Pig SNP position | 154418456 |
PubMed ID | 25188341 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/25188341 |
Study | Genome-Wide Association Meta-analysis of Neuropathologic Features of Alzheimer__s Disease and Related Dementias. |
Disease/Trait | Neuritic plaque |
Initial sample | up to 4,232 individuals |
Replication sample | NA |
Region | 15q26.3 |
Chromosome id | chr15 |
Chromosome position | 99455679 |
Reported gene | intergenic |
Mapped gene | LOC105371017 - LOC105371019 |
Upstream gene id | 105371017 |
Downstream gene id | 105371019 |
SNP gene ids | |
Upstream gene distance | 38471 |
Downstream gene distance | 42813 |
SNP risk allele | rs28479400-G |
SNPs | rs28479400 |
Merged | 0 |
SNP id current | 28479400 |
Context | regulatory_region_variant |
Intergenic | 1 |
Allele frequency | 0.9494 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | (Case/control) |
Or beta | 0.7864 |
%95 Ci | [0.46-1.11] unit increase |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | neuritic plaque measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006798 |
Study accession | GCST002592 |