SNP Detail For rs28377390
1.Mapping Information
Human SNP ID rs28377390
Human chromosome chr15
Human SNP position 97197508
Pig chromosome chr7
Pig SNP position 88206867
2.Annotation Information
PubMed ID26379185
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/26379185
StudyNo Major Host Genetic Risk Factor Contributed to A(H1N1)2009 Influenza Severity.
Disease/TraitSevere influenza A (H1N1) infection
Initial sample49 European ancestry severe cases, 549 European ancestry population controls
Replication sampleNA
Region15q26.2
Chromosome idchr15
Chromosome position97197508
Reported geneLOC101927286, SPATA8
Mapped geneLOC105371005 - LOC105371006
Upstream gene id105371005
Downstream gene id105371006
SNP gene ids
Upstream gene distance78362
Downstream gene distance74701
SNP risk allelers28377390-?
SNPsrs28377390
Merged
SNP id current28377390
Contextintergenic_variant
Intergenic1
Allele frequency0.007407
P value0.000000000004
Pvalue mlog11.397940008672
P value text
Or beta15.31
%95 Ci[5.581-42.02]
PlatformAffymetrix [547296]
CNVN
Mapped traitinfluenza A (H1N1)
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_1001488
Study accessionGCST003123