Human SNP ID | rs2836950 |
---|---|
Human chromosome | chr21 |
Human SNP position | 39232503 |
Pig chromosome | chr13 |
Pig SNP position | 212961110 |
PubMed ID | 25231870 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25231870 |
Study | Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche. |
Disease/Trait | Menarche (age at onset) |
Initial sample | Up to 182,413 European ancestry females |
Replication sample | NA |
Region | 21q22.2 |
Chromosome id | chr21 |
Chromosome position | 39232503 |
Reported gene | BRWD1 |
Mapped gene | BRWD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54014 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2836950-C |
SNPs | rs2836950 |
Merged | 0 |
SNP id current | 2836950 |
Context | splice_region_variant |
Intergenic | 0 |
Allele frequency | 0.64 |
P value | 0.00000000006 |
Pvalue mlog | 10.2218487496163 |
P value text | |
Or beta | 0.03 |
%95 Ci | [0.02-0.04] unit increase |
Platform | Affymetrix, Illumina [2441815] (imputed) |
CNV | N |
Mapped trait | age at menarche |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703 |
Study accession | GCST002541 |