Human SNP ID | rs2833610 |
---|---|
Human chromosome | chr21 |
Human SNP position | 32012873 |
Pig chromosome | chr13 |
Pig SNP position | 206041007 |
PubMed ID | 21490949 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/21490949 |
Study | Transferability of type 2 diabetes implicated loci in multi-ethnic cohorts from Southeast Asia. |
Disease/Trait | Type 2 diabetes |
Initial sample | 2,010 Chinese ancestry cases, 1,945 Chinese ancestry controls, 794 Malay ancestry cases, 1,240 Malay ancestry controls, 977 Asian Indian ancestry cases, 1,169 Asian Indian ancestry controls |
Replication sample | NA |
Region | 21q22.11 |
Chromosome id | chr21 |
Chromosome position | 32012873 |
Reported gene | HUNK |
Mapped gene | HUNK - LINC00159 |
Upstream gene id | 30811 |
Downstream gene id | 100551499 |
SNP gene ids | |
Upstream gene distance | 8809 |
Downstream gene distance | 67608 |
SNP risk allele | rs2833610-A |
SNPs | rs2833610 |
Merged | 0 |
SNP id current | 2833610 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.57 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (Chinese+Malay+Indian) |
Or beta | 1.17 |
%95 Ci | [1.09-1.24] |
Platform | Illumina [~ 2000000] (imputed) |
CNV | N |
Mapped trait | type II diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0001360 |
Study accession | GCST001033 |