Human SNP ID | rs2828478 |
---|---|
Human chromosome | chr21 |
Human SNP position | 23732894 |
Pig chromosome | chr13 |
Pig SNP position | 197349320 |
PubMed ID | 26198764 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26198764 |
Study | Genome-wide association study of schizophrenia in Ashkenazi Jews. |
Disease/Trait | Schizophrenia |
Initial sample | 592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls |
Replication sample | NA |
Region | 21q21.2 |
Chromosome id | chr21 |
Chromosome position | 23732894 |
Reported gene | NR |
Mapped gene | LOC105372749 - LOC105372750 |
Upstream gene id | 105372749 |
Downstream gene id | 105372750 |
SNP gene ids | |
Upstream gene distance | 23593 |
Downstream gene distance | 79728 |
SNP risk allele | rs2828478-A |
SNPs | rs2828478 |
Merged | |
SNP id current | 2828478 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.0000004 |
Pvalue mlog | 6.39794000867203 |
P value text | |
Or beta | 1.06 |
%95 Ci | [NR] |
Platform | Illumina [7158791] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST003048 |