SNP Detail For rs2823048
1.Mapping Information
Human SNP ID rs2823048
Human chromosome chr21
Human SNP position 15089947
Pig chromosome chr13
Pig SNP position 190177602
2.Annotation Information
PubMed ID25085501
JournalBMC Med Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/25085501
StudyIntegrated Genome-wide Association, Coexpression Network, and Expression Single Nucleotide Polymorphism Analysis Identifies Novel Pathway in Allergic Rhinitis.
Disease/TraitAllergic rhinitis in non-asthmatics
Initial sample249 European ancestry cases, 164 Latino cases, 248 African American/Afro-Caribbean cases, 674 European ancestry controls, 588 Latino controls, 464 African American/Afro-Caribbean controls
Replication sampleNA
Region21q21.1
Chromosome idchr21
Chromosome position15089947
Reported geneNR
Mapped geneNRIP1 - LOC105372739
Upstream gene id8204
Downstream gene id105372739
SNP gene ids
Upstream gene distance24044
Downstream gene distance96690
SNP risk allelers2823048-?
SNPsrs2823048
Merged0
SNP id current2823048
Contextintergenic_variant
Intergenic1
Allele frequency0.19
P value0.0000008
Pvalue mlog6.09691001300805
P value text(EA)
Or beta1.92
%95 Ci[1.28-3.85]
PlatformAffymetrix, Illumina [NR] (imputed)
CNVN
Mapped traitallergic rhinitis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005854
Study accessionGCST002551