Human SNP ID | rs2823048 |
---|---|
Human chromosome | chr21 |
Human SNP position | 15089947 |
Pig chromosome | chr13 |
Pig SNP position | 190177602 |
PubMed ID | 25085501 |
---|---|
Journal | BMC Med Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/25085501 |
Study | Integrated Genome-wide Association, Coexpression Network, and Expression Single Nucleotide Polymorphism Analysis Identifies Novel Pathway in Allergic Rhinitis. |
Disease/Trait | Allergic rhinitis in non-asthmatics |
Initial sample | 249 European ancestry cases, 164 Latino cases, 248 African American/Afro-Caribbean cases, 674 European ancestry controls, 588 Latino controls, 464 African American/Afro-Caribbean controls |
Replication sample | NA |
Region | 21q21.1 |
Chromosome id | chr21 |
Chromosome position | 15089947 |
Reported gene | NR |
Mapped gene | NRIP1 - LOC105372739 |
Upstream gene id | 8204 |
Downstream gene id | 105372739 |
SNP gene ids | |
Upstream gene distance | 24044 |
Downstream gene distance | 96690 |
SNP risk allele | rs2823048-? |
SNPs | rs2823048 |
Merged | 0 |
SNP id current | 2823048 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.19 |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (EA) |
Or beta | 1.92 |
%95 Ci | [1.28-3.85] |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | allergic rhinitis |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005854 |
Study accession | GCST002551 |