SNP Detail For rs2820914
1.Mapping Information
Human SNP ID rs2820914
Human chromosome chr9
Human SNP position 7195408
Pig chromosome chr1
Pig SNP position 240622965
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region9p24.1
Chromosome idchr9
Chromosome position7195408
Reported geneJMJD2C
Mapped geneLOC105375969
Upstream gene id
Downstream gene id
SNP gene ids105375969
Upstream gene distance
Downstream gene distance
SNP risk allelers2820914-G
SNPsrs2820914
Merged0
SNP id current2820914
Contextintergenic_variant
Intergenic0
Allele frequency0.14
P value0.000002
Pvalue mlog5.69897000433601
P value text(TG )
Or beta0.02
%95 Ci[NR] mg/dL increase
PlatformIllumina [899892]
CNVN
Mapped traittriglyceride measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004530
Study accessionGCST001762